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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_1978PFAM: protein of unknown function DUF1333; KEGG: lmf:LMOf2365_2086 hypothetical protein; Belongs to the UPF0342 family. (146 aa)    
Predicted Functional Partners:
Exig_1043
KEGG: bpu:BPUM_1606 hypothetical protein; Belongs to the UPF0342 family.
  
 
 
 0.956
Exig_1977
KEGG: bsu:BSU15000 hypothetical protein.
 
    0.884
Exig_1994
PFAM: protein of unknown function DUF1507; KEGG: bha:BH2626 hypothetical protein; Belongs to the UPF0358 family.
 
     0.795
Exig_1974
PFAM: PDZ/DHR/GLGF domain protein; KEGG: bsu:BSU15050 hypothetical protein.
 
     0.695
Exig_2252
PFAM: protein of unknown function DUF1444; KEGG: bcl:ABC2771 hypothetical protein.
  
     0.681
Exig_2044
KEGG: bha:BH2855 hypothetical protein.
  
     0.662
mecA
Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
     0.652
Exig_2319
PFAM: protein of unknown function DUF1450; KEGG: bcl:ABC2936 hypothetical protein.
  
     0.652
Exig_0653
PFAM: membrane-bound metal-dependent hydrolase; KEGG: oih:OB0895 hypothetical protein.
  
     0.620
Exig_1819
Putative ferredoxin; KEGG: bpu:BPUM_2037 possible ferredoxin.
  
     0.620
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.