STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_2000KEGG: bce:BC3955 hypothetical protein. (117 aa)    
Predicted Functional Partners:
Exig_1790
KEGG: gka:GK2193 hypothetical protein.
  
    0.782
Exig_1985
PFAM: cytochrome C oxidase subunit IV; KEGG: bcl:ABC2390 cytochrome caa3 oxidase subunit IV CoxD.
  
     0.773
Exig_0660
KEGG: bha:BH0952 hypothetical protein.
  
     0.771
Exig_0878
KEGG: gtn:GTNG_2376 hypothetical protein.
  
     0.771
Exig_2311
KEGG: oih:OB2349 hypothetical protein.
  
     0.771
Exig_1980
PFAM: Protein of unknown function YugN-like; KEGG: gtn:GTNG_0954 hypothetical protein.
  
     0.770
Exig_1995
KEGG: btl:BALH_3578 hypothetical protein.
  
     0.770
Exig_0913
YqzF; KEGG: bay:RBAM_022390 YqzF.
  
     0.769
Exig_0134
KEGG: bha:BH0242 activation of the KinB signalling pathway of sporulation.
  
     0.764
Exig_1802
YphF; KEGG: bld:BLi02417 YphF.
  
     0.763
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.