STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_2016PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: gka:GK1052 potassium transport system NAD-binding component. (222 aa)    
Predicted Functional Partners:
Exig_0461
H(+)-transporting two-sector ATPase; PFAM: cation transporter; KEGG: btl:BALH_1184 cation transporter.
 
 
 0.959
Exig_2878
Potassium uptake protein, TrkH family; KEGG: bce:BC1390 potassium uptake protein KtrB; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter.
 
 
 0.959
Exig_1925
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.617
Exig_2018
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: oih:OB1050 cytochrome d ubiquinol oxidase subunit I.
 
  
 0.564
Exig_2017
KEGG: ssp:SSP1704 cytochrome bd-type quinol oxidase subunit 2.
  
  
 0.516
Exig_2136
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.506
Exig_1696
KEGG: bld:BLi03345 putative monovalent cation/H+ antiporter subunit A; TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
     
 0.406
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.