node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Exig_2194 | Exig_2195 | Exig_2194 | Exig_2195 | PFAM: Primosomal DnaI domain protein; KEGG: bcy:Bcer98_3264 primosomal DnaI domain protein. | PFAM: replication initiation and membrane attachment family protein; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein. | 0.926 |
Exig_2194 | dinG | Exig_2194 | Exig_1777 | PFAM: Primosomal DnaI domain protein; KEGG: bcy:Bcer98_3264 primosomal DnaI domain protein. | DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease. | 0.631 |
Exig_2194 | mutM | Exig_2194 | Exig_2201 | PFAM: Primosomal DnaI domain protein; KEGG: bcy:Bcer98_3264 primosomal DnaI domain protein. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.556 |
Exig_2194 | polA | Exig_2194 | Exig_2202 | PFAM: Primosomal DnaI domain protein; KEGG: bcy:Bcer98_3264 primosomal DnaI domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.573 |
Exig_2195 | Exig_2194 | Exig_2195 | Exig_2194 | PFAM: replication initiation and membrane attachment family protein; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein. | PFAM: Primosomal DnaI domain protein; KEGG: bcy:Bcer98_3264 primosomal DnaI domain protein. | 0.926 |
Exig_2195 | dinG | Exig_2195 | Exig_1777 | PFAM: replication initiation and membrane attachment family protein; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein. | DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease. | 0.435 |
Exig_2195 | mutM | Exig_2195 | Exig_2201 | PFAM: replication initiation and membrane attachment family protein; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.589 |
Exig_2195 | polA | Exig_2195 | Exig_2202 | PFAM: replication initiation and membrane attachment family protein; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.455 |
Exig_2199 | coaE | Exig_2199 | Exig_2200 | Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gtn:GTNG_2651 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.619 |
Exig_2199 | mutM | Exig_2199 | Exig_2201 | Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gtn:GTNG_2651 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.552 |
Exig_2199 | polA | Exig_2199 | Exig_2202 | Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gtn:GTNG_2651 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.700 |
Exig_2847 | coaE | Exig_2847 | Exig_2200 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.510 |
Exig_2847 | dinG | Exig_2847 | Exig_1777 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease. | 0.593 |
Exig_2847 | mutM | Exig_2847 | Exig_2201 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.632 |
Exig_2847 | nth | Exig_2847 | Exig_1771 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.498 |
Exig_2847 | polA | Exig_2847 | Exig_2202 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.638 |
Exig_2847 | ruvA | Exig_2847 | Exig_2098 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.424 |
Exig_2847 | uvrC | Exig_2847 | Exig_2161 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.486 |
coaE | Exig_2199 | Exig_2200 | Exig_2199 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gtn:GTNG_2651 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.619 |
coaE | Exig_2847 | Exig_2200 | Exig_2847 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain. | 0.510 |