STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_2529KEGG: lin:lin0793 hypothetical protein; Belongs to the HesB/IscA family. (115 aa)    
Predicted Functional Partners:
Exig_2528
KEGG: hau:Haur_4209 hypothetical protein.
       0.612
Exig_0652
YfhJ; KEGG: bay:RBAM_008650 YfhJ.
  
     0.480
Exig_2527
TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: lmo:lmo2514 hypothetical protein.
       0.475
Exig_1059
Membrane protein-like protein; KEGG: bcl:ABC1317 hypothetical protein.
 
     0.462
Exig_1076
KEGG: bcz:BCZK5097 ABC transporter, permease; bacitracin transport permease.
  
     0.455
Exig_0288
KEGG: bha:BH1853 hypothetical protein.
  
     0.447
Exig_1374
PFAM: Peptidoglycan-binding domain 1 protein; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: lin:lin0128 L-alanoyl-D-glutamate peptidase [bacteriophage A500 from Listeria].
  
     0.444
Exig_2945
KEGG: bsu:BSU19030 hypothetical protein.
  
     0.440
Exig_1791
PFAM: conserved hypothetical protein; Protein of unknown function UPF0302; KEGG: gtn:GTNG_2128 hypothetical protein.
  
     0.431
Exig_1074
PFAM: lipolytic protein G-D-S-L family; KEGG: lmo:lmo0755 hypothetical protein.
  
     0.422
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.