STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_00113Inner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily. (516 aa)    
Predicted Functional Partners:
SC1_00112
Membrane fusion component of tripartite multidrug resistance system.
 
 0.979
SC1_00111
Outer membrane component of tripartite multidrug resistance system.
 
 
  0.915
SC1_00986
Multidrug resistance protein A.
 
 0.907
SC1_03353
Membrane fusion component of tripartite multidrug resistance system.
 
 0.907
SC1_02692
hlyD family secretion protein.
 
 0.898
SC1_00110
Transcription regulator of multidrug efflux pump operon, TetR (AcrR) family.
       0.552
SC1_03698
Type I secretion outer membrane protein, TolC precursor.
  
 
 0.451
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.