Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_00243 | SC1_00458 | Hypothetical protein; Belongs to the UPF0386 family. | Hypothetical protein. | 0.463 |
SC1_00455 | SC1_00456 | Hypothetical protein. | Transcriptional regulator, ArsR family. | 0.566 |
SC1_00455 | SC1_00457 | Hypothetical protein. | Uncharacterized conserved protein. | 0.582 |
SC1_00455 | SC1_00458 | Hypothetical protein. | Hypothetical protein. | 0.507 |
SC1_00456 | SC1_00455 | Transcriptional regulator, ArsR family. | Hypothetical protein. | 0.566 |
SC1_00456 | SC1_00457 | Transcriptional regulator, ArsR family. | Uncharacterized conserved protein. | 0.960 |
SC1_00456 | SC1_00458 | Transcriptional regulator, ArsR family. | Hypothetical protein. | 0.855 |
SC1_00456 | SC1_03348 | Transcriptional regulator, ArsR family. | Transcriptional regulator, ArsR family. | 0.641 |
SC1_00456 | SC1_03827 | Transcriptional regulator, ArsR family. | Hypothetical protein; FIG00720498. | 0.423 |
SC1_00457 | SC1_00455 | Uncharacterized conserved protein. | Hypothetical protein. | 0.582 |
SC1_00457 | SC1_00456 | Uncharacterized conserved protein. | Transcriptional regulator, ArsR family. | 0.960 |
SC1_00457 | SC1_00458 | Uncharacterized conserved protein. | Hypothetical protein. | 0.924 |
SC1_00457 | SC1_03347 | Uncharacterized conserved protein. | Hypothetical protein. | 0.565 |
SC1_00457 | SC1_03348 | Uncharacterized conserved protein. | Transcriptional regulator, ArsR family. | 0.586 |
SC1_00457 | SC1_03827 | Uncharacterized conserved protein. | Hypothetical protein; FIG00720498. | 0.583 |
SC1_00457 | SC1_03828 | Uncharacterized conserved protein. | Hypothetical protein; FIG00983437. | 0.450 |
SC1_00458 | SC1_00243 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0386 family. | 0.463 |
SC1_00458 | SC1_00455 | Hypothetical protein. | Hypothetical protein. | 0.507 |
SC1_00458 | SC1_00456 | Hypothetical protein. | Transcriptional regulator, ArsR family. | 0.855 |
SC1_00458 | SC1_00457 | Hypothetical protein. | Uncharacterized conserved protein. | 0.924 |
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