Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_00211 | SC1_00980 | Sphingomyelinase. | Transcriptional regulatory protein. | 0.746 |
SC1_00211 | SC1_01603 | Sphingomyelinase. | tonB-dependent receptor. | 0.650 |
SC1_00211 | SC1_01605 | Sphingomyelinase. | Hypothetical protein. | 0.695 |
SC1_00211 | SC1_02628 | Sphingomyelinase. | tonB-dependent receptor. | 0.424 |
SC1_00211 | SC1_03455 | Sphingomyelinase. | Hypothetical protein. | 0.568 |
SC1_00211 | SC1_03853 | Sphingomyelinase. | Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases. | 0.554 |
SC1_00979 | SC1_00980 | Hypothetical protein; Belongs to the UPF0312 family. | Transcriptional regulatory protein. | 0.565 |
SC1_00980 | SC1_00211 | Transcriptional regulatory protein. | Sphingomyelinase. | 0.746 |
SC1_00980 | SC1_00979 | Transcriptional regulatory protein. | Hypothetical protein; Belongs to the UPF0312 family. | 0.565 |
SC1_00980 | SC1_01375 | Transcriptional regulatory protein. | Autoinducer synthesis protein LuxI. | 0.795 |
SC1_00980 | SC1_01603 | Transcriptional regulatory protein. | tonB-dependent receptor. | 0.439 |
SC1_00980 | SC1_01605 | Transcriptional regulatory protein. | Hypothetical protein. | 0.415 |
SC1_00980 | SC1_02164 | Transcriptional regulatory protein. | aspartyl/Asparaginyl beta-hydroxylase. | 0.430 |
SC1_00980 | SC1_02628 | Transcriptional regulatory protein. | tonB-dependent receptor. | 0.461 |
SC1_00980 | SC1_02949 | Transcriptional regulatory protein. | Signal transduction histidine kinase CheA. | 0.452 |
SC1_00980 | SC1_03455 | Transcriptional regulatory protein. | Hypothetical protein. | 0.462 |
SC1_00980 | SC1_03853 | Transcriptional regulatory protein. | Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases. | 0.592 |
SC1_01375 | SC1_00980 | Autoinducer synthesis protein LuxI. | Transcriptional regulatory protein. | 0.795 |
SC1_01375 | SC1_02949 | Autoinducer synthesis protein LuxI. | Signal transduction histidine kinase CheA. | 0.408 |
SC1_01603 | SC1_00211 | tonB-dependent receptor. | Sphingomyelinase. | 0.650 |
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