Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_00302 | SC1_00454 | Para-aminobenzoate synthase, aminase component. | Transcriptional regulator, AsnC family. | 0.495 |
SC1_00302 | SC1_00545 | Para-aminobenzoate synthase, aminase component. | Siroheme synthase. | 0.418 |
SC1_00302 | SC1_01028 | Para-aminobenzoate synthase, aminase component. | Transcriptional regulator, AsnC family. | 0.495 |
SC1_00302 | SC1_01030 | Para-aminobenzoate synthase, aminase component. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.483 |
SC1_00302 | SC1_02206 | Para-aminobenzoate synthase, aminase component. | 2-oxoglutarate oxidoreductase, alpha subunit. | 0.900 |
SC1_00302 | SC1_03214 | Para-aminobenzoate synthase, aminase component. | Transcriptional regulators; COG1522. | 0.495 |
SC1_00454 | SC1_00302 | Transcriptional regulator, AsnC family. | Para-aminobenzoate synthase, aminase component. | 0.495 |
SC1_00454 | SC1_00545 | Transcriptional regulator, AsnC family. | Siroheme synthase. | 0.533 |
SC1_00454 | SC1_01028 | Transcriptional regulator, AsnC family. | Transcriptional regulator, AsnC family. | 0.760 |
SC1_00454 | SC1_02206 | Transcriptional regulator, AsnC family. | 2-oxoglutarate oxidoreductase, alpha subunit. | 0.503 |
SC1_00545 | SC1_00302 | Siroheme synthase. | Para-aminobenzoate synthase, aminase component. | 0.418 |
SC1_00545 | SC1_00454 | Siroheme synthase. | Transcriptional regulator, AsnC family. | 0.533 |
SC1_00545 | SC1_01028 | Siroheme synthase. | Transcriptional regulator, AsnC family. | 0.533 |
SC1_00545 | SC1_02206 | Siroheme synthase. | 2-oxoglutarate oxidoreductase, alpha subunit. | 0.408 |
SC1_00545 | SC1_03214 | Siroheme synthase. | Transcriptional regulators; COG1522. | 0.533 |
SC1_01028 | SC1_00302 | Transcriptional regulator, AsnC family. | Para-aminobenzoate synthase, aminase component. | 0.495 |
SC1_01028 | SC1_00454 | Transcriptional regulator, AsnC family. | Transcriptional regulator, AsnC family. | 0.760 |
SC1_01028 | SC1_00545 | Transcriptional regulator, AsnC family. | Siroheme synthase. | 0.533 |
SC1_01028 | SC1_01029 | Transcriptional regulator, AsnC family. | Hypothetical protein. | 0.572 |
SC1_01028 | SC1_01030 | Transcriptional regulator, AsnC family. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.443 |
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