Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_00177 | SC1_00709 | Transcriptional regulators. | Hypothetical protein; FIG094713. | 0.765 |
SC1_00177 | SC1_01100 | Transcriptional regulators. | Ribonuclease E. | 0.754 |
SC1_00177 | SC1_01191 | Transcriptional regulators. | TPR repeat. | 0.760 |
SC1_00177 | SC1_01271 | Transcriptional regulators. | Hypothetical protein; FIG00636430. | 0.751 |
SC1_00177 | SC1_01827 | Transcriptional regulators. | TPR repeat. | 0.758 |
SC1_00177 | SC1_02071 | Transcriptional regulators. | Hypothetical protein; FIG00637362. | 0.745 |
SC1_00177 | SC1_02430 | Transcriptional regulators. | Hypothetical protein; FIG01097168. | 0.732 |
SC1_00177 | SC1_03792 | Transcriptional regulators. | Hypothetical protein. | 0.765 |
SC1_00177 | SC1_04006 | Transcriptional regulators. | Membrane protein, putative. | 0.760 |
SC1_00709 | SC1_00177 | Hypothetical protein; FIG094713. | Transcriptional regulators. | 0.765 |
SC1_00709 | SC1_01100 | Hypothetical protein; FIG094713. | Ribonuclease E. | 0.770 |
SC1_00709 | SC1_01191 | Hypothetical protein; FIG094713. | TPR repeat. | 0.773 |
SC1_00709 | SC1_01271 | Hypothetical protein; FIG094713. | Hypothetical protein; FIG00636430. | 0.774 |
SC1_00709 | SC1_01827 | Hypothetical protein; FIG094713. | TPR repeat. | 0.768 |
SC1_00709 | SC1_02071 | Hypothetical protein; FIG094713. | Hypothetical protein; FIG00637362. | 0.774 |
SC1_00709 | SC1_02430 | Hypothetical protein; FIG094713. | Hypothetical protein; FIG01097168. | 0.773 |
SC1_00709 | SC1_03792 | Hypothetical protein; FIG094713. | Hypothetical protein. | 0.772 |
SC1_00709 | SC1_04006 | Hypothetical protein; FIG094713. | Membrane protein, putative. | 0.774 |
SC1_01100 | SC1_00177 | Ribonuclease E. | Transcriptional regulators. | 0.754 |
SC1_01100 | SC1_00709 | Ribonuclease E. | Hypothetical protein; FIG094713. | 0.770 |
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