STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_01284Hypothetical protein. (266 aa)    
Predicted Functional Partners:
SC1_01250
PPE-repeat proteins.
  
     0.728
SC1_02718
Hypothetical protein.
  
     0.717
SC1_01138
Tetratricopeptide repeat protein.
  
     0.697
SC1_00211
Sphingomyelinase.
  
     0.689
SC1_00088
Similar to hedgehog protein.
  
     0.681
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.634
SC1_01830
Two-component signal transduction histidine kinase.
  
     0.603
SC1_03077
Hypothetical protein; FIG00635863.
  
     0.595
SC1_02117
Membrane protein.
  
     0.566
SC1_01244
Hypothetical transmembrane protein.
  
     0.562
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.