Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_00080 | SC1_01338 | ATPase component BioM of energizing module of biotin ECF transporter. | ypfJ protein, zinc metalloprotease superfamily. | 0.617 |
SC1_01337 | SC1_01338 | xaa-Pro dipeptidase. | ypfJ protein, zinc metalloprotease superfamily. | 0.779 |
SC1_01337 | SC1_01339 | xaa-Pro dipeptidase. | Ferredoxin reductase. | 0.523 |
SC1_01337 | SC1_01340 | xaa-Pro dipeptidase. | D-beta-hydroxybutyrate dehydrogenase. | 0.419 |
SC1_01338 | SC1_00080 | ypfJ protein, zinc metalloprotease superfamily. | ATPase component BioM of energizing module of biotin ECF transporter. | 0.617 |
SC1_01338 | SC1_01337 | ypfJ protein, zinc metalloprotease superfamily. | xaa-Pro dipeptidase. | 0.779 |
SC1_01338 | SC1_01339 | ypfJ protein, zinc metalloprotease superfamily. | Ferredoxin reductase. | 0.607 |
SC1_01338 | SC1_01340 | ypfJ protein, zinc metalloprotease superfamily. | D-beta-hydroxybutyrate dehydrogenase. | 0.419 |
SC1_01339 | SC1_01337 | Ferredoxin reductase. | xaa-Pro dipeptidase. | 0.523 |
SC1_01339 | SC1_01338 | Ferredoxin reductase. | ypfJ protein, zinc metalloprotease superfamily. | 0.607 |
SC1_01339 | SC1_01340 | Ferredoxin reductase. | D-beta-hydroxybutyrate dehydrogenase. | 0.730 |
SC1_01340 | SC1_01337 | D-beta-hydroxybutyrate dehydrogenase. | xaa-Pro dipeptidase. | 0.419 |
SC1_01340 | SC1_01338 | D-beta-hydroxybutyrate dehydrogenase. | ypfJ protein, zinc metalloprotease superfamily. | 0.419 |
SC1_01340 | SC1_01339 | D-beta-hydroxybutyrate dehydrogenase. | Ferredoxin reductase. | 0.730 |