Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SC1_01345 | SC1_01346 | SC1_01345 | SC1_01346 | Transcriptional regulatory protein. | Hypothetical protein. | 0.425 |
SC1_01346 | SC1_01345 | SC1_01346 | SC1_01345 | Hypothetical protein. | Transcriptional regulatory protein. | 0.425 |
SC1_01346 | SC1_01347 | SC1_01346 | SC1_01347 | Hypothetical protein. | Dihydroorotase. | 0.572 |
SC1_01346 | SC1_01349 | SC1_01346 | SC1_01349 | Hypothetical protein. | Putative membrane protein. | 0.557 |
SC1_01346 | SC1_01350 | SC1_01346 | SC1_01350 | Hypothetical protein. | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.557 |
SC1_01346 | SC1_01351 | SC1_01346 | SC1_01351 | Hypothetical protein. | Hypothetical protein; FIG01097519. | 0.533 |
SC1_01346 | pyrB | SC1_01346 | SC1_01348 | Hypothetical protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.572 |
SC1_01347 | SC1_01346 | SC1_01347 | SC1_01346 | Dihydroorotase. | Hypothetical protein. | 0.572 |
SC1_01347 | SC1_01349 | SC1_01347 | SC1_01349 | Dihydroorotase. | Putative membrane protein. | 0.753 |
SC1_01347 | SC1_01350 | SC1_01347 | SC1_01350 | Dihydroorotase. | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.848 |
SC1_01347 | SC1_01351 | SC1_01347 | SC1_01351 | Dihydroorotase. | Hypothetical protein; FIG01097519. | 0.795 |
SC1_01347 | pyrB | SC1_01347 | SC1_01348 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SC1_01349 | SC1_01346 | SC1_01349 | SC1_01346 | Putative membrane protein. | Hypothetical protein. | 0.557 |
SC1_01349 | SC1_01347 | SC1_01349 | SC1_01347 | Putative membrane protein. | Dihydroorotase. | 0.753 |
SC1_01349 | SC1_01350 | SC1_01349 | SC1_01350 | Putative membrane protein. | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.773 |
SC1_01349 | SC1_01351 | SC1_01349 | SC1_01351 | Putative membrane protein. | Hypothetical protein; FIG01097519. | 0.737 |
SC1_01349 | pyrB | SC1_01349 | SC1_01348 | Putative membrane protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.906 |
SC1_01350 | SC1_01346 | SC1_01350 | SC1_01346 | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Hypothetical protein. | 0.557 |
SC1_01350 | SC1_01347 | SC1_01350 | SC1_01347 | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Dihydroorotase. | 0.848 |
SC1_01350 | SC1_01349 | SC1_01350 | SC1_01349 | Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Putative membrane protein. | 0.773 |
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