Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SC1_00044 | SC1_00650 | SC1_00044 | SC1_00650 | Exodeoxyribonuclease III. | Exodeoxyribonuclease III. | 0.901 |
SC1_00044 | SC1_01365 | SC1_00044 | SC1_01365 | Exodeoxyribonuclease III. | DNA-3-methyladenine glycosylase II. | 0.821 |
SC1_00044 | SC1_01488 | SC1_00044 | SC1_01488 | Exodeoxyribonuclease III. | Exodeoxyribonuclease III. | 0.901 |
SC1_00044 | SC1_03428 | SC1_00044 | SC1_03428 | Exodeoxyribonuclease III. | ADA regulatory protein. | 0.458 |
SC1_00044 | polA | SC1_00044 | SC1_03012 | Exodeoxyribonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.878 |
SC1_00650 | SC1_00044 | SC1_00650 | SC1_00044 | Exodeoxyribonuclease III. | Exodeoxyribonuclease III. | 0.901 |
SC1_00650 | SC1_01365 | SC1_00650 | SC1_01365 | Exodeoxyribonuclease III. | DNA-3-methyladenine glycosylase II. | 0.821 |
SC1_00650 | SC1_01488 | SC1_00650 | SC1_01488 | Exodeoxyribonuclease III. | Exodeoxyribonuclease III. | 0.874 |
SC1_00650 | SC1_03428 | SC1_00650 | SC1_03428 | Exodeoxyribonuclease III. | ADA regulatory protein. | 0.458 |
SC1_00650 | polA | SC1_00650 | SC1_03012 | Exodeoxyribonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.878 |
SC1_01363 | SC1_01365 | SC1_01363 | SC1_01365 | Histone acetyltransferase HPA2 and related acetyltransferases. | DNA-3-methyladenine glycosylase II. | 0.546 |
SC1_01365 | SC1_00044 | SC1_01365 | SC1_00044 | DNA-3-methyladenine glycosylase II. | Exodeoxyribonuclease III. | 0.821 |
SC1_01365 | SC1_00650 | SC1_01365 | SC1_00650 | DNA-3-methyladenine glycosylase II. | Exodeoxyribonuclease III. | 0.821 |
SC1_01365 | SC1_01363 | SC1_01365 | SC1_01363 | DNA-3-methyladenine glycosylase II. | Histone acetyltransferase HPA2 and related acetyltransferases. | 0.546 |
SC1_01365 | SC1_01366 | SC1_01365 | SC1_01366 | DNA-3-methyladenine glycosylase II. | Ferredoxin, 2Fe-2S. | 0.702 |
SC1_01365 | SC1_01488 | SC1_01365 | SC1_01488 | DNA-3-methyladenine glycosylase II. | Exodeoxyribonuclease III. | 0.821 |
SC1_01365 | SC1_03009 | SC1_01365 | SC1_03009 | DNA-3-methyladenine glycosylase II. | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.781 |
SC1_01365 | SC1_03428 | SC1_01365 | SC1_03428 | DNA-3-methyladenine glycosylase II. | ADA regulatory protein. | 0.867 |
SC1_01365 | polA | SC1_01365 | SC1_03012 | DNA-3-methyladenine glycosylase II. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.631 |
SC1_01365 | recA | SC1_01365 | SC1_01203 | DNA-3-methyladenine glycosylase II. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.513 |
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