STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_01372Hypothetical protein; FIG01006409. (344 aa)    
Predicted Functional Partners:
SC1_01373
Bll0063 protein.
 
     0.862
SC1_00729
Putative plasmid stabilization protein.
 
     0.779
SC1_00732
Bll0063 protein.
 
     0.779
SC1_00841
Uncharacterized conserved small protein.
  
     0.773
SC1_00840
Conjugative transfer protein TrbI.
  
     0.767
SC1_01551
Conjugative transfer protein TrbI.
  
     0.767
SC1_00839
Conjugative transfer protein TrbG.
  
     0.757
SC1_01550
Conjugative transfer protein TrbG.
  
     0.755
SC1_03688
Antirestriction protein.
 
     0.701
ybeY
Metal-dependent hydrolase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.663
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.