STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_01648Probable phosphotransferase. (341 aa)    
Predicted Functional Partners:
SC1_01650
acyl-CoA dehydrogenase.
  0.994
SC1_03890
isovaleryl-CoA dehydrogenase.
  0.887
SC1_00881
butyryl-CoA dehydrogenase.
 
  0.881
SC1_00392
Hydrolase, haloacid dehalogenase-like family.
     0.873
SC1_04302
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.793
SC1_01649
3-oxoacyl-(acyl-carrier protein) reductase.
  
  0.790
SC1_01933
butyryl-CoA dehydrogenase.
  0.753
SC1_01647
Transcriptional regulator, TetR family.
 
     0.751
SC1_03897
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.713
SC1_04295
enoyl-CoA hydratase.
  
 0.713
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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