Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_01080 | SC1_01685 | Hypothetical protein; FIG00636423. | Sugar transferase; FIG071646. | 0.620 |
SC1_01080 | SC1_01686 | Hypothetical protein; FIG00636423. | Sensory transduction histidine kinases. | 0.794 |
SC1_01080 | SC1_01688 | Hypothetical protein; FIG00636423. | TPR repeat. | 0.651 |
SC1_01080 | SC1_02426 | Hypothetical protein; FIG00636423. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.558 |
SC1_01080 | SC1_02949 | Hypothetical protein; FIG00636423. | Signal transduction histidine kinase CheA. | 0.521 |
SC1_01590 | SC1_01686 | Phytochrome, two-component sensor histidine kinase. | Sensory transduction histidine kinases. | 0.944 |
SC1_01590 | SC1_01687 | Phytochrome, two-component sensor histidine kinase. | Response regulatory protein. | 0.498 |
SC1_01590 | SC1_02949 | Phytochrome, two-component sensor histidine kinase. | Signal transduction histidine kinase CheA. | 0.998 |
SC1_01590 | SC1_03273 | Phytochrome, two-component sensor histidine kinase. | Sensory box histidine kinase. | 0.994 |
SC1_01685 | SC1_01080 | Sugar transferase; FIG071646. | Hypothetical protein; FIG00636423. | 0.620 |
SC1_01685 | SC1_01686 | Sugar transferase; FIG071646. | Sensory transduction histidine kinases. | 0.883 |
SC1_01685 | SC1_01687 | Sugar transferase; FIG071646. | Response regulatory protein. | 0.757 |
SC1_01685 | SC1_01688 | Sugar transferase; FIG071646. | TPR repeat. | 0.820 |
SC1_01685 | SC1_02949 | Sugar transferase; FIG071646. | Signal transduction histidine kinase CheA. | 0.516 |
SC1_01685 | SC1_03273 | Sugar transferase; FIG071646. | Sensory box histidine kinase. | 0.453 |
SC1_01685 | SC1_04178 | Sugar transferase; FIG071646. | Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit. | 0.400 |
SC1_01685 | SC1_04220 | Sugar transferase; FIG071646. | Acetoin dehydrogenase E1 component alpha-subunit. | 0.400 |
SC1_01686 | SC1_01080 | Sensory transduction histidine kinases. | Hypothetical protein; FIG00636423. | 0.794 |
SC1_01686 | SC1_01590 | Sensory transduction histidine kinases. | Phytochrome, two-component sensor histidine kinase. | 0.944 |
SC1_01686 | SC1_01685 | Sensory transduction histidine kinases. | Sugar transferase; FIG071646. | 0.883 |
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