STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SC1_01774Response regulator. (125 aa)    
Predicted Functional Partners:
SC1_02950
Signal transduction histidine kinase.
  
 0.915
SC1_02949
Signal transduction histidine kinase CheA.
 
 0.873
SC1_03273
Sensory box histidine kinase.
 
 0.820
SC1_00253
Hypothetical protein; FIG056333.
 
 0.770
SC1_01461
PAS/PAC domain.
 
 0.767
SC1_01419
Chemotaxis protein methyltransferase CheR.
 
 0.724
SC1_02016
Nitrogen regulation protein NtrB.
 
 0.698
SC1_03409
Sensor histidine kinase ChvG.
 
 
 0.693
SC1_00883
Two-component hybrid sensor and regulator.
 
 0.679
SC1_01775
N-formylglutamate deformylase.
       0.666
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.