STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_01830Two-component signal transduction histidine kinase. (457 aa)    
Predicted Functional Partners:
SC1_03273
Sensory box histidine kinase.
 
 0.982
SC1_02426
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.981
SC1_02949
Signal transduction histidine kinase CheA.
  
 0.973
SC1_01590
Phytochrome, two-component sensor histidine kinase.
   
 0.944
SC1_04178
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
    
 0.813
SC1_04220
Acetoin dehydrogenase E1 component alpha-subunit.
    
 0.813
SC1_01831
Glycosyltransferase.
 
     0.790
SC1_01825
Hypothetical protein; FIG00636565.
  
 
  0.789
SC1_01201
Sensory box histidine kinase/response regulator.
 
 
 0.767
SC1_01138
Tetratricopeptide repeat protein.
  
     0.762
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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