Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_01865 | SC1_01866 | Carboxynorspermidine decarboxylase, putative; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Membrane protein, putative. | 0.741 |
SC1_01865 | SC1_01867 | Carboxynorspermidine decarboxylase, putative; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Proline iminopeptidase. | 0.755 |
SC1_01865 | SC1_01868 | Carboxynorspermidine decarboxylase, putative; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Carboxynorspermidine dehydrogenase, putative. | 0.969 |
SC1_01866 | SC1_01865 | Membrane protein, putative. | Carboxynorspermidine decarboxylase, putative; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.741 |
SC1_01866 | SC1_01867 | Membrane protein, putative. | Proline iminopeptidase. | 0.779 |
SC1_01866 | SC1_01868 | Membrane protein, putative. | Carboxynorspermidine dehydrogenase, putative. | 0.559 |
SC1_01867 | SC1_01865 | Proline iminopeptidase. | Carboxynorspermidine decarboxylase, putative; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.755 |
SC1_01867 | SC1_01866 | Proline iminopeptidase. | Membrane protein, putative. | 0.779 |
SC1_01867 | SC1_01868 | Proline iminopeptidase. | Carboxynorspermidine dehydrogenase, putative. | 0.571 |
SC1_01868 | SC1_01865 | Carboxynorspermidine dehydrogenase, putative. | Carboxynorspermidine decarboxylase, putative; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.969 |
SC1_01868 | SC1_01866 | Carboxynorspermidine dehydrogenase, putative. | Membrane protein, putative. | 0.559 |
SC1_01868 | SC1_01867 | Carboxynorspermidine dehydrogenase, putative. | Proline iminopeptidase. | 0.571 |