STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02016Nitrogen regulation protein NtrB. (360 aa)    
Predicted Functional Partners:
SC1_02015
Nitrogen regulation protein NtrC.
 0.996
SC1_00269
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 0.991
SC1_01595
Sensory box sensor histidine kinase/response regulator.
 
0.986
SC1_03775
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 0.967
SC1_02336
Hypothetical protein; FIG01097037.
  
 0.935
SC1_02013
Nitrogen regulation protein NtrX.
 0.923
SC1_01462
Sensor histidine kinase.
 
 
 0.901
SC1_03273
Sensory box histidine kinase.
 
 
0.889
SC1_01419
Chemotaxis protein methyltransferase CheR.
 
 
 0.888
SC1_01461
PAS/PAC domain.
 
 
0.883
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.