STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02401Hypothetical protein. (40 aa)    
Predicted Functional Partners:
SC1_02402
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
       0.741
SC1_02399
Glycosyl transferase group 1.
       0.569
SC1_02400
Probable hydrolase.
       0.569
SC1_02403
uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family.
       0.440
SC1_02404
Conserved hypothetical protein probably; Involved in sulfate reduction.
       0.440
SC1_02405
Sulfite reductase [NADPH] hemoprotein beta-component.
       0.440
SC1_02406
Oxidoreductase probably; Involved in sulfite reduction.
       0.440
SC1_02398
Dioxygenases related to 2-nitropropane dioxygenase.
       0.417
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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