Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SC1_00249 | SC1_02130 | SC1_00249 | SC1_02130 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Glutathione S-transferase. | 0.643 |
SC1_00249 | SC1_02440 | SC1_00249 | SC1_02440 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.529 |
SC1_00249 | SC1_03726 | SC1_00249 | SC1_03726 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Glutathione S-transferase. | 0.589 |
SC1_01485 | SC1_02130 | SC1_01485 | SC1_02130 | Hypothetical protein. | Glutathione S-transferase. | 0.468 |
SC1_01485 | SC1_02440 | SC1_01485 | SC1_02440 | Hypothetical protein. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.468 |
SC1_01485 | SC1_03726 | SC1_01485 | SC1_03726 | Hypothetical protein. | Glutathione S-transferase. | 0.468 |
SC1_01485 | proS | SC1_01485 | SC1_01913 | Hypothetical protein. | prolyl-tRNA synthetase, archaeal/eukaryal type; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.967 |
SC1_01485 | rpoA | SC1_01485 | SC1_00435 | Hypothetical protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.600 |
SC1_02130 | SC1_00249 | SC1_02130 | SC1_00249 | Glutathione S-transferase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.643 |
SC1_02130 | SC1_01485 | SC1_02130 | SC1_01485 | Glutathione S-transferase. | Hypothetical protein. | 0.468 |
SC1_02130 | SC1_02440 | SC1_02130 | SC1_02440 | Glutathione S-transferase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.713 |
SC1_02130 | SC1_03726 | SC1_02130 | SC1_03726 | Glutathione S-transferase. | Glutathione S-transferase. | 0.746 |
SC1_02130 | proS | SC1_02130 | SC1_01913 | Glutathione S-transferase. | prolyl-tRNA synthetase, archaeal/eukaryal type; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.467 |
SC1_02130 | rpoA | SC1_02130 | SC1_00435 | Glutathione S-transferase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.561 |
SC1_02436 | SC1_02437 | SC1_02436 | SC1_02437 | ATP-dependent helicase HrpB. | Hypothetical protein. | 0.779 |
SC1_02436 | SC1_02438 | SC1_02436 | SC1_02438 | ATP-dependent helicase HrpB. | Decaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.816 |
SC1_02436 | SC1_02439 | SC1_02436 | SC1_02439 | ATP-dependent helicase HrpB. | Chorismate mutase I. | 0.596 |
SC1_02436 | SC1_02440 | SC1_02436 | SC1_02440 | ATP-dependent helicase HrpB. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.558 |
SC1_02437 | SC1_02436 | SC1_02437 | SC1_02436 | Hypothetical protein. | ATP-dependent helicase HrpB. | 0.779 |
SC1_02437 | SC1_02438 | SC1_02437 | SC1_02438 | Hypothetical protein. | Decaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.779 |
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