STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02492Probable two-component response regulator. (377 aa)    
Predicted Functional Partners:
SC1_02336
Hypothetical protein; FIG01097037.
 0.939
SC1_00568
Diguanylate cyclase/phosphodiesterase.
 
 0.860
SC1_00408
Alr3170 protein.
 0.857
SC1_02949
Signal transduction histidine kinase CheA.
 
 
 0.845
SC1_03371
Diguanylate cyclase/phosphodiesterase.
0.716
SC1_01677
Hypothetical protein.
 0.694
SC1_01462
Sensor histidine kinase.
 
 0.686
SC1_02578
Diguanylate cyclase/phosphodiesterase.
 
0.674
SC1_02679
Diguanylate cyclase/phosphodiesterase.
0.664
SC1_00894
Diguanylate cyclase/phosphodiesterase.
0.663
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.