STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02495Permeases of the major facilitator superfamily. (397 aa)    
Predicted Functional Partners:
SC1_02496
Ribose operon repressor.
 
     0.822
SC1_03427
Hypothetical protein.
  
     0.651
SC1_02494
Beta-glucosidase.
 
     0.639
SC1_03425
Hypothetical protein.
  
     0.633
SC1_02500
Tryptophan halogenase, putative.
 
     0.630
SC1_02499
Peptide transport system permease protein sapC; TC 3.A.1.5.5.
 
     0.626
SC1_03112
Hypothetical protein.
  
     0.621
SC1_02497
Tryptophan halogenase.
 
     0.595
SC1_02498
Pass1-related protein.
 
     0.587
SC1_00203
Hypothetical protein; FIG00636546.
  
     0.580
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.