Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_00994 | SC1_01156 | Glutamate synthase [NADPH] large chain. | PTS system, N-acetylglucosamine-specific IIA component. | 0.408 |
SC1_00994 | SC1_01157 | Glutamate synthase [NADPH] large chain. | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | 0.412 |
SC1_00994 | SC1_02496 | Glutamate synthase [NADPH] large chain. | Ribose operon repressor. | 0.917 |
SC1_00994 | SC1_02499 | Glutamate synthase [NADPH] large chain. | Peptide transport system permease protein sapC; TC 3.A.1.5.5. | 0.412 |
SC1_01156 | SC1_00994 | PTS system, N-acetylglucosamine-specific IIA component. | Glutamate synthase [NADPH] large chain. | 0.408 |
SC1_01156 | SC1_01157 | PTS system, N-acetylglucosamine-specific IIA component. | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | 0.999 |
SC1_01156 | SC1_02496 | PTS system, N-acetylglucosamine-specific IIA component. | Ribose operon repressor. | 0.681 |
SC1_01157 | SC1_00994 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Glutamate synthase [NADPH] large chain. | 0.412 |
SC1_01157 | SC1_01156 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | PTS system, N-acetylglucosamine-specific IIA component. | 0.999 |
SC1_01157 | SC1_02496 | Phosphoenolpyruvate-protein phosphotransferase of PTS system. | Ribose operon repressor. | 0.964 |
SC1_02493 | SC1_02494 | Homolog of fucose/glucose/galactose permeases. | Beta-glucosidase. | 0.739 |
SC1_02493 | SC1_02495 | Homolog of fucose/glucose/galactose permeases. | Permeases of the major facilitator superfamily. | 0.470 |
SC1_02493 | SC1_02496 | Homolog of fucose/glucose/galactose permeases. | Ribose operon repressor. | 0.574 |
SC1_02493 | SC1_02497 | Homolog of fucose/glucose/galactose permeases. | Tryptophan halogenase. | 0.468 |
SC1_02493 | SC1_02498 | Homolog of fucose/glucose/galactose permeases. | Pass1-related protein. | 0.460 |
SC1_02493 | SC1_02499 | Homolog of fucose/glucose/galactose permeases. | Peptide transport system permease protein sapC; TC 3.A.1.5.5. | 0.427 |
SC1_02493 | SC1_02500 | Homolog of fucose/glucose/galactose permeases. | Tryptophan halogenase, putative. | 0.453 |
SC1_02494 | SC1_02493 | Beta-glucosidase. | Homolog of fucose/glucose/galactose permeases. | 0.739 |
SC1_02494 | SC1_02495 | Beta-glucosidase. | Permeases of the major facilitator superfamily. | 0.639 |
SC1_02494 | SC1_02496 | Beta-glucosidase. | Ribose operon repressor. | 0.739 |
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