STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02582Predicted protein. (414 aa)    
Predicted Functional Partners:
SC1_03455
Hypothetical protein.
  
     0.579
SC1_02581
D-alanine--D-alanine ligase.
       0.536
SC1_00211
Sphingomyelinase.
  
     0.515
SC1_03915
Pectate lyase.
  
     0.497
SC1_02800
Hypothetical protein.
  
     0.492
SC1_00099
Hypothetical protein.
  
    0.489
SC1_01597
Copper resistance protein CopC.
  
     0.474
SC1_03686
Hypothetical protein.
  
     0.469
SC1_03294
Hypothetical protein.
  
     0.453
nhaA
Na+/H+ antiporter NhaA type; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
   
    0.439
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.