STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02663Glutathione S-transferase. (205 aa)    
Predicted Functional Partners:
SC1_02664
Fumarylacetoacetase.
  
 
  0.741
SC1_02662
Gluconolactonase, putative.
 
     0.717
SC1_02661
Alkylhydroperoxidase AhpD core domain.
 
     0.700
SC1_02660
Hypothetical protein.
 
     0.643
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
  
  
  0.600
SC1_02658
Major facilitator family transporter.
  
    0.590
SC1_02659
3-oxoacyl-[acyl-carrier protein] reductase.
       0.586
SC1_02130
Glutathione S-transferase.
  
  
  0.580
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.561
SC1_03727
Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.553
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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