STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_02749Inner membrane protein. (186 aa)    
Predicted Functional Partners:
SC1_03083
Sulfite oxidase and related enzymes; COG2041.
  
  
 0.900
SC1_00893
P pilus assembly protein, porin PapC.
  
     0.474
SC1_02750
Hypothetical protein.
       0.445
SC1_00892
P pilus assembly protein, chaperone PapD.
  
     0.436
SC1_00792
Uncharacterized protein conserved in bacteria, NMA0228-like; Belongs to the UPF0276 family.
   
  
 0.412
SC1_03904
Hypothetical protein.
  
     0.405
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.