STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBtolB protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (457 aa)    
Predicted Functional Partners:
pal
18K peptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.987
SC1_03127
motA/TolQ/ExbB proton channel family protein.
 
  
 0.966
SC1_00239
Outer membrane protein A precursor.
 
 0.949
SC1_03128
Biopolymer transport protein ExbD/TolR.
 
  
 0.945
SC1_00056
ompA family protein.
 
 0.940
SC1_02278
TPR repeat containing hypothetical protein.
 
  
 0.917
SC1_03129
tolA protein.
  
 
 0.904
SC1_03126
4-hydroxybenzoyl-CoA thioesterase family active site.
 
   
 0.880
SC1_03863
Outer membrane protein A precursor.
 
 0.864
SC1_00594
Outer membrane protein A precursor.
  
 0.845
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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