STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_03217Choline-sulfatase. (613 aa)    
Predicted Functional Partners:
SC1_03219
Gluconate 5-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.653
SC1_03228
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.609
SC1_03218
enoyl-CoA hydratase.
       0.518
SC1_00007
Alkyl sulfatase.
 
     0.499
SC1_03877
Hypothetical protein; FIG00635908.
  
   0.439
SC1_03216
Hypothetical protein; FIG01097263.
 
     0.432
SC1_00754
Hypothetical protein.
  
     0.411
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.