Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SC1_00270 | SC1_03729 | Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent. | Hypothetical protein. | 0.491 |
SC1_00270 | SC1_03814 | Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent. | Gfa-like protein. | 0.491 |
SC1_03726 | SC1_03729 | Glutathione S-transferase. | Hypothetical protein. | 0.758 |
SC1_03726 | SC1_03736 | Glutathione S-transferase. | Uncharacterized glutathione S-transferase-like protein. | 0.910 |
SC1_03726 | SC1_03814 | Glutathione S-transferase. | Gfa-like protein. | 0.518 |
SC1_03729 | SC1_00270 | Hypothetical protein. | Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent. | 0.491 |
SC1_03729 | SC1_03726 | Hypothetical protein. | Glutathione S-transferase. | 0.758 |
SC1_03729 | SC1_03736 | Hypothetical protein. | Uncharacterized glutathione S-transferase-like protein. | 0.697 |
SC1_03729 | SC1_03814 | Hypothetical protein. | Gfa-like protein. | 0.410 |
SC1_03736 | SC1_03726 | Uncharacterized glutathione S-transferase-like protein. | Glutathione S-transferase. | 0.910 |
SC1_03736 | SC1_03729 | Uncharacterized glutathione S-transferase-like protein. | Hypothetical protein. | 0.697 |
SC1_03736 | SC1_03814 | Uncharacterized glutathione S-transferase-like protein. | Gfa-like protein. | 0.422 |
SC1_03814 | SC1_00270 | Gfa-like protein. | Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent. | 0.491 |
SC1_03814 | SC1_03726 | Gfa-like protein. | Glutathione S-transferase. | 0.518 |
SC1_03814 | SC1_03729 | Gfa-like protein. | Hypothetical protein. | 0.410 |
SC1_03814 | SC1_03736 | Gfa-like protein. | Uncharacterized glutathione S-transferase-like protein. | 0.422 |
SC1_03814 | SC1_03815 | Gfa-like protein. | Transcriptional regulator, DeoR family. | 0.610 |
SC1_03814 | SC1_03816 | Gfa-like protein. | Hypothetical protein. | 0.530 |
SC1_03814 | SC1_03817 | Gfa-like protein. | Hypothetical protein. | 0.407 |
SC1_03815 | SC1_03814 | Transcriptional regulator, DeoR family. | Gfa-like protein. | 0.610 |
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