STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SC1_04275Transcriptional regulator, TetR family. (196 aa)    
Predicted Functional Partners:
SC1_04276
Hypothetical protein.
       0.718
SC1_04277
Sodium-dependent transporter family protein; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
       0.494
SC1_02364
Non-ribosomal peptide synthetase.
  
   
 0.486
SC1_04178
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
  
  
  0.481
SC1_02726
Glycine cleavage system transcriptional activator.
  
 
   0.437
SC1_02363
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.408
Your Current Organism:
Sphingopyxis sp. C1
NCBI taxonomy Id: 262667
Other names: S. sp. C-1, Sphingopyxis sp. C-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.