Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00196 | F933_00198 | GCA_000931715_01885 | GCA_000931715_01883 | Unannotated protein. | Unannotated protein. | 0.953 |
F933_00196 | F933_00199 | GCA_000931715_01885 | GCA_000931715_01882 | Unannotated protein. | Unannotated protein. | 0.954 |
F933_00196 | F933_00855 | GCA_000931715_01885 | GCA_000931715_03318 | Unannotated protein. | Unannotated protein. | 0.577 |
F933_00196 | F933_02318 | GCA_000931715_01885 | GCA_000931715_00190 | Unannotated protein. | Unannotated protein. | 0.685 |
F933_00196 | F933_02319 | GCA_000931715_01885 | GCA_000931715_00191 | Unannotated protein. | Unannotated protein. | 0.652 |
F933_00196 | tolR | GCA_000931715_01885 | GCA_000931715_02551 | Unannotated protein. | Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.582 |
F933_00198 | F933_00196 | GCA_000931715_01883 | GCA_000931715_01885 | Unannotated protein. | Unannotated protein. | 0.953 |
F933_00198 | F933_00199 | GCA_000931715_01883 | GCA_000931715_01882 | Unannotated protein. | Unannotated protein. | 0.852 |
F933_00198 | F933_02317 | GCA_000931715_01883 | GCA_000931715_00189 | Unannotated protein. | Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.551 |
F933_00198 | F933_02318 | GCA_000931715_01883 | GCA_000931715_00190 | Unannotated protein. | Unannotated protein. | 0.883 |
F933_00198 | pal | GCA_000931715_01883 | GCA_000931715_02548 | Unannotated protein. | Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.683 |
F933_00198 | tolB | GCA_000931715_01883 | GCA_000931715_02549 | Unannotated protein. | Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.471 |
F933_00199 | F933_00196 | GCA_000931715_01882 | GCA_000931715_01885 | Unannotated protein. | Unannotated protein. | 0.954 |
F933_00199 | F933_00198 | GCA_000931715_01882 | GCA_000931715_01883 | Unannotated protein. | Unannotated protein. | 0.852 |
F933_00199 | F933_02317 | GCA_000931715_01882 | GCA_000931715_00189 | Unannotated protein. | Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.689 |
F933_00199 | F933_02318 | GCA_000931715_01882 | GCA_000931715_00190 | Unannotated protein. | Unannotated protein. | 0.885 |
F933_00199 | pal | GCA_000931715_01882 | GCA_000931715_02548 | Unannotated protein. | Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.613 |
F933_00855 | F933_00196 | GCA_000931715_03318 | GCA_000931715_01885 | Unannotated protein. | Unannotated protein. | 0.577 |
F933_00855 | F933_02317 | GCA_000931715_03318 | GCA_000931715_00189 | Unannotated protein. | Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.603 |
F933_00855 | F933_02318 | GCA_000931715_03318 | GCA_000931715_00190 | Unannotated protein. | Unannotated protein. | 0.648 |
page 1 of 4