Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_02657 | F933_02658 | GCA_000931715_00292 | GCA_000931715_00293 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.728 |
F933_02657 | F933_02659 | GCA_000931715_00292 | GCA_000931715_00294 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.502 |
F933_02657 | argS | GCA_000931715_00292 | GCA_000931715_01173 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.506 |
F933_02657 | cysS | GCA_000931715_00292 | GCA_000931715_00711 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.518 |
F933_02657 | guaB | GCA_000931715_00292 | GCA_000931715_01964 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.524 |
F933_02657 | leuS | GCA_000931715_00292 | GCA_000931715_01252 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.510 |
F933_02657 | metG | GCA_000931715_00292 | GCA_000931715_01841 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.520 |
F933_02657 | pheT | GCA_000931715_00292 | GCA_000931715_01352 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.592 |
F933_02657 | purL | GCA_000931715_00292 | GCA_000931715_02560 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.594 |
F933_02657 | serS | GCA_000931715_00292 | GCA_000931715_00256 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.610 |
F933_02658 | F933_02657 | GCA_000931715_00293 | GCA_000931715_00292 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.728 |
F933_02658 | F933_02659 | GCA_000931715_00293 | GCA_000931715_00294 | Unannotated protein. | Unannotated protein. | 0.732 |
F933_02659 | F933_02657 | GCA_000931715_00294 | GCA_000931715_00292 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.502 |
F933_02659 | F933_02658 | GCA_000931715_00294 | GCA_000931715_00293 | Unannotated protein. | Unannotated protein. | 0.732 |
argS | F933_02657 | GCA_000931715_01173 | GCA_000931715_00292 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.506 |
argS | cysS | GCA_000931715_01173 | GCA_000931715_00711 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.527 |
argS | leuS | GCA_000931715_01173 | GCA_000931715_01252 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.884 |
argS | metG | GCA_000931715_01173 | GCA_000931715_01841 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.956 |
argS | pheT | GCA_000931715_01173 | GCA_000931715_01352 | Unannotated protein. | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.812 |
argS | purL | GCA_000931715_01173 | GCA_000931715_02560 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.592 |
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