Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00453 | F933_02649 | GCA_000931715_00468 | GCA_000931715_00284 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein. | 0.920 |
F933_00453 | F933_03200 | GCA_000931715_00468 | GCA_000931715_02224 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Belongs to the monomeric-type IDH family. | 0.926 |
F933_00453 | adk | GCA_000931715_00468 | GCA_000931715_01049 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.969 |
F933_00453 | argH | GCA_000931715_00468 | GCA_000931715_00815 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein. | 0.915 |
F933_00453 | mdh | GCA_000931715_00468 | GCA_000931715_00209 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.923 |
F933_00453 | purA | GCA_000931715_00468 | GCA_000931715_02720 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.992 |
F933_00453 | purC | GCA_000931715_00468 | GCA_000931715_02062 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Belongs to the SAICAR synthetase family. | 0.991 |
F933_00453 | purH | GCA_000931715_00468 | GCA_000931715_02642 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein. | 0.992 |
F933_00453 | purL | GCA_000931715_00468 | GCA_000931715_02560 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.993 |
F933_00453 | surE | GCA_000931715_00468 | GCA_000931715_00458 | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.920 |
F933_02649 | F933_00453 | GCA_000931715_00284 | GCA_000931715_00468 | Unannotated protein. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.920 |
F933_02649 | F933_03200 | GCA_000931715_00284 | GCA_000931715_02224 | Unannotated protein. | Unannotated protein; Belongs to the monomeric-type IDH family. | 0.920 |
F933_02649 | mdh | GCA_000931715_00284 | GCA_000931715_00209 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.682 |
F933_02649 | purL | GCA_000931715_00284 | GCA_000931715_02560 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.438 |
F933_03200 | F933_00453 | GCA_000931715_02224 | GCA_000931715_00468 | Unannotated protein; Belongs to the monomeric-type IDH family. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.926 |
F933_03200 | F933_02649 | GCA_000931715_02224 | GCA_000931715_00284 | Unannotated protein; Belongs to the monomeric-type IDH family. | Unannotated protein. | 0.920 |
F933_03200 | argH | GCA_000931715_02224 | GCA_000931715_00815 | Unannotated protein; Belongs to the monomeric-type IDH family. | Unannotated protein. | 0.907 |
F933_03200 | mdh | GCA_000931715_02224 | GCA_000931715_00209 | Unannotated protein; Belongs to the monomeric-type IDH family. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.941 |
adk | F933_00453 | GCA_000931715_01049 | GCA_000931715_00468 | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.969 |
adk | purA | GCA_000931715_01049 | GCA_000931715_02720 | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.631 |
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