Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00629 | F933_00631 | GCA_000931715_00566 | GCA_000931715_00564 | Unannotated protein. | Unannotated protein. | 0.669 |
F933_00629 | F933_01954 | GCA_000931715_00566 | GCA_000931715_01172 | Unannotated protein. | Unannotated protein. | 0.540 |
F933_00629 | purC | GCA_000931715_00566 | GCA_000931715_02062 | Unannotated protein. | Unannotated protein; Belongs to the SAICAR synthetase family. | 0.812 |
F933_00629 | purE | GCA_000931715_00566 | GCA_000931715_02330 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.726 |
F933_00629 | purF | GCA_000931715_00566 | GCA_000931715_00565 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.984 |
F933_00629 | purH | GCA_000931715_00566 | GCA_000931715_02642 | Unannotated protein. | Unannotated protein. | 0.487 |
F933_00629 | purL | GCA_000931715_00566 | GCA_000931715_02560 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.987 |
F933_00629 | purM | GCA_000931715_00566 | GCA_000931715_02537 | Unannotated protein. | Unannotated protein. | 0.838 |
F933_00629 | purT | GCA_000931715_00566 | GCA_000931715_02778 | Unannotated protein. | Unannotated protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.533 |
F933_00629 | pyrD | GCA_000931715_00566 | GCA_000931715_00567 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.884 |
F933_00631 | F933_00629 | GCA_000931715_00564 | GCA_000931715_00566 | Unannotated protein. | Unannotated protein. | 0.669 |
F933_00631 | F933_01954 | GCA_000931715_00564 | GCA_000931715_01172 | Unannotated protein. | Unannotated protein. | 0.502 |
F933_00631 | purF | GCA_000931715_00564 | GCA_000931715_00565 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.568 |
F933_00631 | pyrD | GCA_000931715_00564 | GCA_000931715_00567 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.527 |
F933_01954 | F933_00629 | GCA_000931715_01172 | GCA_000931715_00566 | Unannotated protein. | Unannotated protein. | 0.540 |
F933_01954 | F933_00631 | GCA_000931715_01172 | GCA_000931715_00564 | Unannotated protein. | Unannotated protein. | 0.502 |
purC | F933_00629 | GCA_000931715_02062 | GCA_000931715_00566 | Unannotated protein; Belongs to the SAICAR synthetase family. | Unannotated protein. | 0.812 |
purC | purE | GCA_000931715_02062 | GCA_000931715_02330 | Unannotated protein; Belongs to the SAICAR synthetase family. | Unannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.999 |
purC | purF | GCA_000931715_02062 | GCA_000931715_00565 | Unannotated protein; Belongs to the SAICAR synthetase family. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.976 |
purC | purH | GCA_000931715_02062 | GCA_000931715_02642 | Unannotated protein; Belongs to the SAICAR synthetase family. | Unannotated protein. | 0.978 |
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