Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00378 | F933_01496 | GCA_000931715_00758 | GCA_000931715_01631 | Unannotated protein. | Unannotated protein. | 0.922 |
F933_00378 | F933_01497 | GCA_000931715_00758 | GCA_000931715_01630 | Unannotated protein. | Unannotated protein. | 0.982 |
F933_00378 | F933_02721 | GCA_000931715_00758 | GCA_000931715_02906 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.937 |
F933_00378 | carA | GCA_000931715_00758 | GCA_000931715_02117 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.921 |
F933_00378 | carB | GCA_000931715_00758 | GCA_000931715_02116 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.921 |
F933_00378 | glmS | GCA_000931715_00758 | GCA_000931715_02055 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.925 |
F933_00378 | glsA | GCA_000931715_00758 | GCA_000931715_02237 | Unannotated protein. | Unannotated protein; Belongs to the glutaminase family. | 0.917 |
F933_00378 | hutG | GCA_000931715_00758 | GCA_000931715_02842 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.917 |
F933_00378 | proA | GCA_000931715_00758 | GCA_000931715_00675 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.917 |
F933_00378 | purF | GCA_000931715_00758 | GCA_000931715_00565 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.916 |
F933_01496 | F933_00378 | GCA_000931715_01631 | GCA_000931715_00758 | Unannotated protein. | Unannotated protein. | 0.922 |
F933_01496 | F933_01497 | GCA_000931715_01631 | GCA_000931715_01630 | Unannotated protein. | Unannotated protein. | 0.999 |
F933_01496 | F933_02721 | GCA_000931715_01631 | GCA_000931715_02906 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.920 |
F933_01496 | carA | GCA_000931715_01631 | GCA_000931715_02117 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.907 |
F933_01496 | carB | GCA_000931715_01631 | GCA_000931715_02116 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.913 |
F933_01496 | glmS | GCA_000931715_01631 | GCA_000931715_02055 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.914 |
F933_01496 | hutG | GCA_000931715_01631 | GCA_000931715_02842 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.907 |
F933_01496 | proA | GCA_000931715_01631 | GCA_000931715_00675 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.907 |
F933_01496 | purF | GCA_000931715_01631 | GCA_000931715_00565 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.909 |
F933_01497 | F933_00378 | GCA_000931715_01630 | GCA_000931715_00758 | Unannotated protein. | Unannotated protein. | 0.982 |
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