Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_01902 | F933_01903 | GCA_000931715_01120 | GCA_000931715_01121 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.997 |
F933_01902 | F933_02586 | GCA_000931715_01120 | GCA_000931715_00221 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.572 |
F933_01902 | F933_03197 | GCA_000931715_01120 | GCA_000931715_02227 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.807 |
F933_01902 | prpB | GCA_000931715_01120 | GCA_000931715_01119 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.987 |
F933_01903 | F933_01902 | GCA_000931715_01121 | GCA_000931715_01120 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.997 |
F933_01903 | F933_02586 | GCA_000931715_01121 | GCA_000931715_00221 | Unannotated protein. | Unannotated protein. | 0.989 |
F933_01903 | F933_02643 | GCA_000931715_01121 | GCA_000931715_00278 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.755 |
F933_01903 | F933_03197 | GCA_000931715_01121 | GCA_000931715_02227 | Unannotated protein. | Unannotated protein. | 0.826 |
F933_01903 | prpB | GCA_000931715_01121 | GCA_000931715_01119 | Unannotated protein. | Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.836 |
F933_01903 | rplS | GCA_000931715_01121 | GCA_000931715_01663 | Unannotated protein. | Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.768 |
F933_01903 | rpmB | GCA_000931715_01121 | GCA_000931715_00185 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.737 |
F933_01903 | rpmF | GCA_000931715_01121 | GCA_000931715_01900 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.728 |
F933_01903 | rpmJ | GCA_000931715_01121 | GCA_000931715_00612 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.718 |
F933_01903 | rpsP | GCA_000931715_01121 | GCA_000931715_01660 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.716 |
F933_02586 | F933_01902 | GCA_000931715_00221 | GCA_000931715_01120 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.572 |
F933_02586 | F933_01903 | GCA_000931715_00221 | GCA_000931715_01121 | Unannotated protein. | Unannotated protein. | 0.989 |
F933_02586 | prpB | GCA_000931715_00221 | GCA_000931715_01119 | Unannotated protein. | Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.711 |
F933_02643 | F933_01903 | GCA_000931715_00278 | GCA_000931715_01121 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.755 |
F933_02643 | F933_03197 | GCA_000931715_00278 | GCA_000931715_02227 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.805 |
F933_02643 | prpB | GCA_000931715_00278 | GCA_000931715_01119 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.869 |
page 1 of 3