Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00220 | F933_01642 | GCA_000931715_01861 | GCA_000931715_01970 | Unannotated protein. | Unannotated protein. | 0.845 |
F933_00220 | F933_01918 | GCA_000931715_01861 | GCA_000931715_01136 | Unannotated protein. | Unannotated protein. | 0.497 |
F933_00220 | F933_01920 | GCA_000931715_01861 | GCA_000931715_01138 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.416 |
F933_00220 | F933_02721 | GCA_000931715_01861 | GCA_000931715_02906 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.440 |
F933_00220 | cysG | GCA_000931715_01861 | GCA_000931715_00257 | Unannotated protein. | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.654 |
F933_01497 | F933_01642 | GCA_000931715_01630 | GCA_000931715_01970 | Unannotated protein. | Unannotated protein. | 0.948 |
F933_01497 | F933_01918 | GCA_000931715_01630 | GCA_000931715_01136 | Unannotated protein. | Unannotated protein. | 0.412 |
F933_01497 | F933_02721 | GCA_000931715_01630 | GCA_000931715_02906 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.943 |
F933_01497 | cysG | GCA_000931715_01630 | GCA_000931715_00257 | Unannotated protein. | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.440 |
F933_01497 | dadA | GCA_000931715_01630 | GCA_000931715_01137 | Unannotated protein. | Unannotated protein; Oxidative deamination of D-amino acids. | 0.600 |
F933_01497 | sucD | GCA_000931715_01630 | GCA_000931715_00288 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.915 |
F933_01642 | F933_00220 | GCA_000931715_01970 | GCA_000931715_01861 | Unannotated protein. | Unannotated protein. | 0.845 |
F933_01642 | F933_01497 | GCA_000931715_01970 | GCA_000931715_01630 | Unannotated protein. | Unannotated protein. | 0.948 |
F933_01642 | F933_01918 | GCA_000931715_01970 | GCA_000931715_01136 | Unannotated protein. | Unannotated protein. | 0.444 |
F933_01642 | F933_02721 | GCA_000931715_01970 | GCA_000931715_02906 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.950 |
F933_01642 | sucD | GCA_000931715_01970 | GCA_000931715_00288 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.981 |
F933_01918 | F933_00220 | GCA_000931715_01136 | GCA_000931715_01861 | Unannotated protein. | Unannotated protein. | 0.497 |
F933_01918 | F933_01497 | GCA_000931715_01136 | GCA_000931715_01630 | Unannotated protein. | Unannotated protein. | 0.412 |
F933_01918 | F933_01642 | GCA_000931715_01136 | GCA_000931715_01970 | Unannotated protein. | Unannotated protein. | 0.444 |
F933_01918 | F933_01920 | GCA_000931715_01136 | GCA_000931715_01138 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.529 |
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