Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00206 | F933_01267 | GCA_000931715_01875 | GCA_000931715_01224 | Unannotated protein. | Unannotated protein. | 0.552 |
F933_01265 | F933_01266 | GCA_000931715_01226 | GCA_000931715_01225 | Unannotated protein. | Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | 0.752 |
F933_01265 | F933_01267 | GCA_000931715_01226 | GCA_000931715_01224 | Unannotated protein. | Unannotated protein. | 0.729 |
F933_01265 | F933_01268 | GCA_000931715_01226 | GCA_000931715_01223 | Unannotated protein. | Unannotated protein. | 0.725 |
F933_01265 | mnmC | GCA_000931715_01226 | GCA_000931715_01222 | Unannotated protein. | Unannotated protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.693 |
F933_01266 | F933_01265 | GCA_000931715_01225 | GCA_000931715_01226 | Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | Unannotated protein. | 0.752 |
F933_01266 | F933_01267 | GCA_000931715_01225 | GCA_000931715_01224 | Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | Unannotated protein. | 0.824 |
F933_01266 | F933_01268 | GCA_000931715_01225 | GCA_000931715_01223 | Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | Unannotated protein. | 0.824 |
F933_01266 | mnmC | GCA_000931715_01225 | GCA_000931715_01222 | Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | Unannotated protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.804 |
F933_01267 | F933_00206 | GCA_000931715_01224 | GCA_000931715_01875 | Unannotated protein. | Unannotated protein. | 0.552 |
F933_01267 | F933_01265 | GCA_000931715_01224 | GCA_000931715_01226 | Unannotated protein. | Unannotated protein. | 0.729 |
F933_01267 | F933_01266 | GCA_000931715_01224 | GCA_000931715_01225 | Unannotated protein. | Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | 0.824 |
F933_01267 | F933_01268 | GCA_000931715_01224 | GCA_000931715_01223 | Unannotated protein. | Unannotated protein. | 0.872 |
F933_01267 | F933_01497 | GCA_000931715_01224 | GCA_000931715_01630 | Unannotated protein. | Unannotated protein. | 0.463 |
F933_01267 | F933_01861 | GCA_000931715_01224 | GCA_000931715_01079 | Unannotated protein. | Unannotated protein. | 0.424 |
F933_01267 | mnmC | GCA_000931715_01224 | GCA_000931715_01222 | Unannotated protein. | Unannotated protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.866 |
F933_01267 | tatA | GCA_000931715_01224 | GCA_000931715_00570 | Unannotated protein. | Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.426 |
F933_01268 | F933_01265 | GCA_000931715_01223 | GCA_000931715_01226 | Unannotated protein. | Unannotated protein. | 0.725 |
F933_01268 | F933_01266 | GCA_000931715_01223 | GCA_000931715_01225 | Unannotated protein. | Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | 0.824 |
F933_01268 | F933_01267 | GCA_000931715_01223 | GCA_000931715_01224 | Unannotated protein. | Unannotated protein. | 0.872 |
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