STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F933_01671Unannotated protein. (124 aa)    
Predicted Functional Partners:
rpsU
Unannotated protein; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.951
rpmA
Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.
    
 
 0.950
rpmH
Unannotated protein; Belongs to the bacterial ribosomal protein bL34 family.
    
 
 0.949
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.949
rpmC
Unannotated protein; Belongs to the universal ribosomal protein uL29 family.
    
 
 0.948
rplY
Unannotated protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.
   
   0.948
rplI
Unannotated protein; Binds to the 23S rRNA.
  
   0.948
rplO
Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.947
rpsE
Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 
 0.947
rpsP
Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.
    
 
 0.947
Your Current Organism:
Acinetobacter beijerinckii
NCBI taxonomy Id: 262668
Other names: Acinetobacter beijerinckii Nemec et al. 2009, Acinetobacter sp. NIPH 2011, Acinetobacter sp. NIPH 2013, Acinetobacter sp. NIPH 2014, Acinetobacter sp. NIPH 2015, Acinetobacter sp. NIPH 2016, Acinetobacter sp. NIPH 2017, Acinetobacter sp. NIPH 2018, Acinetobacter sp. NIPH 2025, Acinetobacter sp. NIPH 2372, Acinetobacter sp. NIPH 770, Acinetobacter sp. NIPH 832, Acinetobacter sp. NIPH 838, Acinetobacter sp. NIPH 850, Acinetobacter sp. phenon 7, CCM 7266, CCUG 51249, LUH 4759, NIPH 838, strain 58a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.