Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_01307 | dsbB | GCA_000931715_00680 | GCA_000931715_02020 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.447 |
F933_01307 | nudJ | GCA_000931715_00680 | GCA_000931715_00465 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.473 |
F933_01689 | F933_01690 | GCA_000931715_02017 | GCA_000931715_02018 | Unannotated protein. | Unannotated protein. | 0.773 |
F933_01689 | F933_01691 | GCA_000931715_02017 | GCA_000931715_02019 | Unannotated protein. | Unannotated protein. | 0.773 |
F933_01689 | dsbB | GCA_000931715_02017 | GCA_000931715_02020 | Unannotated protein. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.463 |
F933_01689 | gshA | GCA_000931715_02017 | GCA_000931715_02021 | Unannotated protein. | Unannotated protein; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.437 |
F933_01690 | F933_01689 | GCA_000931715_02018 | GCA_000931715_02017 | Unannotated protein. | Unannotated protein. | 0.773 |
F933_01690 | F933_01691 | GCA_000931715_02018 | GCA_000931715_02019 | Unannotated protein. | Unannotated protein. | 0.860 |
F933_01690 | dsbB | GCA_000931715_02018 | GCA_000931715_02020 | Unannotated protein. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.463 |
F933_01690 | gshA | GCA_000931715_02018 | GCA_000931715_02021 | Unannotated protein. | Unannotated protein; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.437 |
F933_01691 | F933_01689 | GCA_000931715_02019 | GCA_000931715_02017 | Unannotated protein. | Unannotated protein. | 0.773 |
F933_01691 | F933_01690 | GCA_000931715_02019 | GCA_000931715_02018 | Unannotated protein. | Unannotated protein. | 0.860 |
F933_01691 | dsbB | GCA_000931715_02019 | GCA_000931715_02020 | Unannotated protein. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.463 |
F933_01691 | gshA | GCA_000931715_02019 | GCA_000931715_02021 | Unannotated protein. | Unannotated protein; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.439 |
F933_01695 | dsbB | GCA_000931715_02023 | GCA_000931715_02020 | Unannotated protein. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.655 |
F933_01695 | gshA | GCA_000931715_02023 | GCA_000931715_02021 | Unannotated protein. | Unannotated protein; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.667 |
F933_01807 | F933_01864 | GCA_000931715_02315 | GCA_000931715_01082 | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Unannotated protein. | 0.402 |
F933_01807 | dsbB | GCA_000931715_02315 | GCA_000931715_02020 | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.482 |
F933_01864 | F933_01807 | GCA_000931715_01082 | GCA_000931715_02315 | Unannotated protein. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.402 |
F933_01864 | F933_02090 | GCA_000931715_01082 | GCA_000931715_00830 | Unannotated protein. | Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.610 |
page 1 of 3