Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00379 | F933_00380 | GCA_000931715_00757 | GCA_000931715_00756 | Unannotated protein. | Unannotated protein. | 0.902 |
F933_00379 | F933_02226 | GCA_000931715_00757 | GCA_000931715_01476 | Unannotated protein. | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | 0.545 |
F933_00379 | F933_02615 | GCA_000931715_00757 | GCA_000931715_00250 | Unannotated protein. | Unannotated protein; Belongs to the FPP/GGPP synthase family. | 0.417 |
F933_00379 | ubiA | GCA_000931715_00757 | GCA_000931715_02612 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.696 |
F933_00379 | ubiG | GCA_000931715_00757 | GCA_000931715_01081 | Unannotated protein. | Unannotated protein; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.986 |
F933_00380 | F933_00379 | GCA_000931715_00756 | GCA_000931715_00757 | Unannotated protein. | Unannotated protein. | 0.902 |
F933_00380 | F933_02226 | GCA_000931715_00756 | GCA_000931715_01476 | Unannotated protein. | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | 0.535 |
F933_00380 | F933_02615 | GCA_000931715_00756 | GCA_000931715_00250 | Unannotated protein. | Unannotated protein; Belongs to the FPP/GGPP synthase family. | 0.423 |
F933_00380 | ubiA | GCA_000931715_00756 | GCA_000931715_02612 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.724 |
F933_00380 | ubiG | GCA_000931715_00756 | GCA_000931715_01081 | Unannotated protein. | Unannotated protein; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.976 |
F933_02226 | F933_00379 | GCA_000931715_01476 | GCA_000931715_00757 | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | Unannotated protein. | 0.545 |
F933_02226 | F933_00380 | GCA_000931715_01476 | GCA_000931715_00756 | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | Unannotated protein. | 0.535 |
F933_02226 | F933_02615 | GCA_000931715_01476 | GCA_000931715_00250 | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | Unannotated protein; Belongs to the FPP/GGPP synthase family. | 0.556 |
F933_02226 | ubiA | GCA_000931715_01476 | GCA_000931715_02612 | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.730 |
F933_02226 | ubiG | GCA_000931715_01476 | GCA_000931715_01081 | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | Unannotated protein; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.586 |
F933_02615 | F933_00379 | GCA_000931715_00250 | GCA_000931715_00757 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein. | 0.417 |
F933_02615 | F933_00380 | GCA_000931715_00250 | GCA_000931715_00756 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein. | 0.423 |
F933_02615 | F933_02226 | GCA_000931715_00250 | GCA_000931715_01476 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. | 0.556 |
F933_02615 | ubiA | GCA_000931715_00250 | GCA_000931715_02612 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.951 |
F933_03013 | ubiA | GCA_000931715_02613 | GCA_000931715_02612 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.728 |
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