Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F933_00660 | F933_00795 | GCA_000931715_00535 | GCA_000931715_03378 | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Unannotated protein. | 0.407 |
F933_00660 | F933_01053 | GCA_000931715_00535 | GCA_000931715_03120 | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Unannotated protein. | 0.407 |
F933_00660 | F933_01054 | GCA_000931715_00535 | GCA_000931715_03119 | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Unannotated protein. | 0.418 |
F933_00660 | F933_02212 | GCA_000931715_00535 | GCA_000931715_01462 | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.559 |
F933_00795 | F933_00660 | GCA_000931715_03378 | GCA_000931715_00535 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.407 |
F933_00795 | F933_01054 | GCA_000931715_03378 | GCA_000931715_03119 | Unannotated protein. | Unannotated protein. | 0.902 |
F933_00795 | F933_02212 | GCA_000931715_03378 | GCA_000931715_01462 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.407 |
F933_01052 | F933_01053 | GCA_000931715_03121 | GCA_000931715_03120 | Unannotated protein. | Unannotated protein. | 0.417 |
F933_01052 | F933_01054 | GCA_000931715_03121 | GCA_000931715_03119 | Unannotated protein. | Unannotated protein. | 0.417 |
F933_01052 | ilvA | GCA_000931715_03121 | GCA_000931715_03122 | Unannotated protein. | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.476 |
F933_01053 | F933_00660 | GCA_000931715_03120 | GCA_000931715_00535 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.407 |
F933_01053 | F933_01052 | GCA_000931715_03120 | GCA_000931715_03121 | Unannotated protein. | Unannotated protein. | 0.417 |
F933_01053 | F933_01054 | GCA_000931715_03120 | GCA_000931715_03119 | Unannotated protein. | Unannotated protein. | 0.996 |
F933_01053 | F933_02212 | GCA_000931715_03120 | GCA_000931715_01462 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.407 |
F933_01053 | ilvA | GCA_000931715_03120 | GCA_000931715_03122 | Unannotated protein. | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.409 |
F933_01054 | F933_00660 | GCA_000931715_03119 | GCA_000931715_00535 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.418 |
F933_01054 | F933_00795 | GCA_000931715_03119 | GCA_000931715_03378 | Unannotated protein. | Unannotated protein. | 0.902 |
F933_01054 | F933_01052 | GCA_000931715_03119 | GCA_000931715_03121 | Unannotated protein. | Unannotated protein. | 0.417 |
F933_01054 | F933_01053 | GCA_000931715_03119 | GCA_000931715_03120 | Unannotated protein. | Unannotated protein. | 0.996 |
F933_01054 | F933_02212 | GCA_000931715_03119 | GCA_000931715_01462 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.418 |
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