STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F933_00998Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (279 aa)    
Predicted Functional Partners:
F933_02137
Unannotated protein.
 
    0.946
F933_00999
Unannotated protein.
 
     0.836
F933_01394
Unannotated protein.
  
     0.620
F933_03106
Unannotated protein; Belongs to the cytochrome P450 family.
  
 0.615
F933_00136
Unannotated protein.
  
     0.589
F933_03103
Unannotated protein.
  
     0.587
F933_02552
Unannotated protein.
  
     0.586
F933_00135
Unannotated protein.
  
     0.584
F933_02455
Unannotated protein.
  
     0.582
F933_02774
Unannotated protein.
  
     0.582
Your Current Organism:
Acinetobacter beijerinckii
NCBI taxonomy Id: 262668
Other names: Acinetobacter beijerinckii Nemec et al. 2009, Acinetobacter sp. NIPH 2011, Acinetobacter sp. NIPH 2013, Acinetobacter sp. NIPH 2014, Acinetobacter sp. NIPH 2015, Acinetobacter sp. NIPH 2016, Acinetobacter sp. NIPH 2017, Acinetobacter sp. NIPH 2018, Acinetobacter sp. NIPH 2025, Acinetobacter sp. NIPH 2372, Acinetobacter sp. NIPH 770, Acinetobacter sp. NIPH 832, Acinetobacter sp. NIPH 838, Acinetobacter sp. NIPH 850, Acinetobacter sp. phenon 7, CCM 7266, CCUG 51249, LUH 4759, NIPH 838, strain 58a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.