Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sgaAPentitol phosphotransferase enzyme II, A component; Identified by sequence similarity; putative; ORF located using Blastx;COG1762;TC:4.A.7.1.1. (159 aa)    
Predicted Functional Partners:
sgaT-1
Transport protein SgaT; Identified by sequence similarity; putative; ORF located using Blastx;COG3037;TC:4.A.7.1.1.
 
 
 0.990
sgaT-2
Transport protein SgaT; Identified by sequence similarity; putative; ORF located using Blastx;COG3037;TC:4.A.7.1.1.
 
 
 0.989
MS53_0027
Putative PTS system, IIB component; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx;COG3414.
  
 
 0.983
MS53_0682
Putative PTS system, IIB component; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG3414.
  
 
 0.928
ptsH
Phophocarrier protein HPr; Identified by sequence similarity; putative; ORF located using Blastx;COG1925.
  
 
 0.923
sgaA-1
PTS system, IIA component; Identified by sequence similarity; putative; ORF located using Blastx;COG1762.
  
  
 
0.903
MS53_0032
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0561.
     
 0.830
sgaH
3-hexulose-6- phosphate synthase; Identified by sequence similarity; putative; ORF located using Glimmer;GeneMark;Blastx;COG0269.
  
  
 0.798
sgaU
Hexulose-6-phosphate isomerase; Identified by sequence similarity; putative; ORF located using Blastx;COG3623.
       0.785
rpiR
Transcriptional regulator; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1737.
     
 0.746
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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