STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgaESugar isomerase SgaE; Identified by sequence similarity; putative; ORF located using Blastx;COG0235. (221 aa)    
Predicted Functional Partners:
sgaU
Hexulose-6-phosphate isomerase; Identified by sequence similarity; putative; ORF located using Blastx;COG3623.
   
 0.996
rpe
Ribulose-phosphate 3-epimerase; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG0036.
    
 0.923
MS53_0535
Putative citrate lyase beta chain; Identified by sequence similarity; putative; ORF located using Blastx;COG2301.
   
    0.852
sgaH
3-hexulose-6- phosphate synthase; Identified by sequence similarity; putative; ORF located using Glimmer;GeneMark;Blastx;COG0269.
 
  
 0.841
MS53_0032
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;COG0561.
       0.799
MS53_0027
Putative PTS system, IIB component; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx;COG3414.
  
  
 0.688
sgaA
Pentitol phosphotransferase enzyme II, A component; Identified by sequence similarity; putative; ORF located using Blastx;COG1762;TC:4.A.7.1.1.
  
  
 0.675
sgaT-1
Transport protein SgaT; Identified by sequence similarity; putative; ORF located using Blastx;COG3037;TC:4.A.7.1.1.
  
  
 0.567
ptsG
PTS system, glucose-specific IIABC component; Identified by sequence similarity; putative; ORF located using Blastx;COG1263;TC:4.A.1.1.2.
   
  
 0.537
MS53_0025
Conserved hypothetical protein; Catalyzes the hydrolysis of D-xylono-1,4-lactone-5-phosphate and L-arabino-1,4-lactone-5-phosphate. Also able to hydroyze carboxy 1,4-lactones; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family.
       0.486
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.