Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MS53_0036Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx;COG1404. (369 aa)    
Predicted Functional Partners:
MS53_0285
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
 
 0.683
MS53_0329
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
 
 0.683
MS53_0334
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
 
 0.683
pknB
Serine/threonine-protein kinase; Identified by sequence similarity; putative; ORF located using Blastx;COG0515.
   
 
 0.668
MS53_0590
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx;TC:9.B.4.4.1.
 
 
 
 0.625
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
   
 0.601
dinP
DNA polymerase IV; Identified by sequence similarity; putative; ORF located using Blastx;COG0389.
   
   0.572
MS53_0177
Putative transposase ISMHp1-like protein; Identified by sequence similarity; putative; ORF located using Blastx.
  
     0.536
mgtA
Cation-transporting P-type ATPase; Identified by sequence similarity; putative; ORF located using Blastx;COG0474;TC:3.A.3.2.4.
   
 
 0.461
dnaK
Chaperone protein dnaK - heat shock protein 70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.433
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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