Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MS53_0069Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx. (692 aa)    
Predicted Functional Partners:
MS53_0468
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.781
MS53_0157
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
 
     0.780
MS53_0466
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.778
MS53_0472
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark;Blastx.
 
     0.778
MS53_0158
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;GeneMark;Blastx.
 
     0.777
MS53_0517
Putative lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx.
 
     0.777
MS53_0463
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;GeneMark;Blastx.
 
     0.769
MS53_0087
Putative P37-like ABC transporter substrate-binding lipoprotein; Part of a high-affinity transport system.
  
     0.760
MS53_0129
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer;Blastx.
  
     0.727
atpA-3
ATP synthase alpha chain; Identified by sequence similarity; putative; ORF located using Blastx;COG0056.
 
     0.602
Your Current Organism:
Mycoplasma synoviae
NCBI taxonomy Id: 262723
Other names: M. synoviae 53, Mycoplasma synoviae 53, Mycoplasma synoviae str. 53, Mycoplasma synoviae strain 53
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